Recent Advances in Optically Controlled PROTAC
Proteolysis-targeting chimera (PROTAC) technology is a groundbreaking therapeutic approach with significant clinical potential for degrading disease-inducing proteins within β¦
I am Muzi Ouyang (欧ι³ζ¨ε) β I go by Mia. I am a PhD candidate in Chemistry at Tsinghua University, advised by Prof. Ying Tan (θ°θ±) at the Institute of Biopharmaceutical and Health Engineering (iBHE) in Shenzhen. I work on targeted protein degradation: designing bioPROTACs that recruit E3 ligases to destroy proteins small molecules struggle to drug β and working out why that degradation sometimes fails.
My dissertation has two halves. The first is a dual-target bioPROTAC that co-degrades ERΞ± and PI3K p85Ξ±, re-sensitizing tamoxifen-resistant breast cancer cells to endocrine therapy. The second is a KRAS-targeting degrader, where I found a resistance mutation in the hypervariable region that lets KRAS escape a multimerization-dependent platform, and used all-atom molecular dynamics to trace the conformational mechanism behind the escape.
Alongside the wet lab I work in computational protein design β Rosetta, ProteinMPNN and AlphaFold2 β including an end-to-end reproduction of the CLAIRE de novo binder-design pipeline, published openly with its debugging narrative. My training spans animal science, basic medicine and chemistry, which is why I move between wet-lab mechanism and computational design rather than choosing between them.
I expect to defend in June 2027 and am seeking postdoctoral positions starting in late 2027. If my work overlaps with your group’s, I’d be glad to hear from you β I’ll gladly send my CV. Write to me at mumumia.1009@gmail.com, or oymzmia@163.com if you are corresponding from within China.
PhD in Chemistry
Sep 2023 β Jun 2027 (expected)
Tsinghua University
Master's Degree in Basic Medicine
Sep 2020 β Jul 2023
Sun Yat-sen University
Bachelor's Degree in Animal Sciences
Sep 2016 β Jul 2020
Northwest A&F University
Targeted protein degradation can reach proteins that conventional inhibitors cannot, because it only has to bind a target, not occupy a functional pocket. I build bioPROTACs β genetically encoded degraders that fuse a target-binding domain to an E3 ligase β and ask what happens when they stop working.
My dissertation approaches that from two directions. One is a dual-target bioPROTAC co-degrading ERΞ± and PI3K p85Ξ±, which re-sensitizes tamoxifen-resistant breast cancer cells to endocrine therapy and acts synergistically with tamoxifen (CI < 0.4). The other is a KRAS-targeting degrader built on a TRIM21βRBCC scaffold, where I identified a mutation in the hypervariable region that lets KRAS escape degradation. Because that platform depends on multimerization, the escape is mechanistic rather than incidental β I traced it with all-atom molecular dynamics of the farnesylated, membrane-embedded protein, and confirmed it against an orthogonal, multimerization-independent degrader.
Resistance is the thread running through both. A degrader that works in a naive line and fails in a resistant one is telling you something about the target’s conformational behaviour, and I think that signal is worth reading rather than engineering around.
This is pulling me toward de novo binder design. If the limiting reagent for a bioPROTAC is a binding domain against a hard target, then designing binders directly β rather than borrowing them β is the way to widen what degradation can reach. I have been building that capability independently: reproducing the CLAIRE small-molecule binder-design pipeline end-to-end, and testing whether published multistate-design diagnostics generalize to the conformational states of KRAS. That intersection β structure-based design meeting degrader mechanism β is where I would like to do my postdoc.
Proteolysis-targeting chimera (PROTAC) technology is a groundbreaking therapeutic approach with significant clinical potential for degrading disease-inducing proteins within β¦
Cancer cells, as well as surrounding stromal and inflammatory cells, form an inflammatory tumor microenvironment (TME) to promote all stages of carcinogenesis. As an emerging post- β¦
Institute of Biopharmaceutical and Health Engineering (iBHE)
Tsinghua Shenzhen International Graduate School
Tsinghua Campus, Xili University Town, Nanshan District
Shenzhen 518055, China
Happy to arrange calls across time zones
I expect to defend in June 2027 and am looking for postdoc positions starting in late 2027, in computational protein design, targeted protein degradation, and chemical biology. Happy to share my research statement and references on request.